Acerca de este curso: This course will assist you with recreating work that a previous coworker completed, revisiting a project you abandoned some time ago, or simply reproducing a document with a consistent format and workflow. Incomplete information about how the work was done, where the files are, and which is the most recent version can give rise to many complications. This course focuses on the proper documentation creation process, allowing you and your colleagues to easily reproduce the components of your workflow. Throughout this course, you'll receive helpful demonstrations of RStudio and the R Markdown language and engage in active learning opportunities to help you build a professional online portfolio.
Creada por: Emory University
Enseñado por: Melinda Higgins, Associate Research Professor/Senior Biostatistician
School of Nursing
| Nivel | Beginner |
| Idioma | English |
| Cómo aprobar | Aprueba todas las tareas calificadas para completar el curso. |
| Calificaciones del usuario |
Programa
SEMANA 1
Introduction to Reproducible Research and Dynamic Documentation
This module provides an introduction to the concepts surrounding reproducibility and the Open Science movement, RStudio and GitHub, and foundational cases and authors in the field.
11 videos, 6 lecturas, 1 cuestionario de práctica
- Lecture: Course Outline and Grading Information
- Vídeo: Welcome to Week 1!
- Vídeo: History and Importance of Reproducibility
- Vídeo: Dynamic Documentation and Literate Programming
- Vídeo: Components and Examples of Reproducibility
- Lecture: Articles, Resources, and File Organization Examples
- Lecture: [Lecture Prep] - Links for R and RStudio
- Vídeo: R and RStudio Introduction
- Lecture: R and RStudio Resources
- Lecture: [Lecture Prep] - GIT and GitHub
- Vídeo: Git and Github - Part 1
- Vídeo: Git and Github - Part 2
- Vídeo: Git and Github - Part 3
- Vídeo: Creating Your First Document
- Lecture: Books on Reproducibility and Tools of the Trade
- Quiz pour s'exercer: Practice
- Vídeo: Wrap-Up
Calificado: Week 1
SEMANA 2
R Markdown: Syntax, Document, and Presentation Formats
This module explores the R Markdown syntax to format and customize the layout of presentations or reports and will also look at inserting and creating objects such as tables, images, or video within documents.
8 videos, 11 lecturas, 1 cuestionario de práctica
- Lecture: [Lecture Prep] - Links for R Markdown and YAML
- Vídeo: Introduction to R Markdown and the YAML Header
- Lecture: [Lecture Prep] - R Markdown File
- Vídeo: R Markdown Syntax
- Lecture: R Markdown Resources
- Vídeo: Figures, Tables, and Equations
- Lecture: Resources for Tables and Equations
- Lecture: [Lecture Prep] - Media and R Markdown Files
- Vídeo: Images, Videos, and Footnotes
- Lecture: Resource for Embedding Videos
- Lecture: [Lecture Prep] - R Markdown File
- Vídeo: Presentation Formats
- Lecture: Resources for the Presentation Format
- Lecture: [Lecture Prep] - Link for Bookdown Demo
- Vídeo: Book Format
- Lecture: Resources for the Book Format
- Quiz pour s'exercer: Practice
- Lecture: [Graded Quiz Prep] - Week 2 Instructions
- Vídeo: Wrap-Up
Calificado: Week 2
SEMANA 3
R Markdown Templates: Processing and Customizing
This module goes further with R Markdown to help turn documents, reports, and presentations into templates for easier automation, reproducibility, and customization.
9 videos, 6 lecturas, 1 cuestionario de práctica
- Lecture: [Lecture Prep] - CSS File
- Vídeo: Customizing an HTML Document
- Lecture: Note on MD files
- Vídeo: Customizing a WORD Document
- Vídeo: Customizing Other Document Formats
- Lecture: Resources for Customizing Documents
- Lecture: [Lecture Prep] - R Script File
- Vídeo: Working with R Packages
- Lecture: [Lecture Prep] - Code File
- Vídeo: Building a Document Template, Part 1
- Vídeo: Building a Document Template, Part 2
- Vídeo: Adding Parameters in a Document Template
- Lecture: Resources for Parameters and Template Development
- Quiz pour s'exercer: Practice
- Vídeo: Wrap-Up
Calificado: Week 3
SEMANA 4
Leveraging Custom Templates from Leading Scientific Journals
This module delves into custom templates available for websites, books, and scientific publishers, such as Elsevier and the IEEE, with the chance to create your first R Package.
6 videos, 3 lecturas, 1 cuestionario de práctica
- Lecture: Custom Template Packages and References
- Vídeo: Examples and Demo of Existing Templates
- Vídeo: Exploring R Packages and Their Components and Files
- Lecture: Resources for Packages and Forking Repositories
- Lecture: [Lecture Prep] - Code File
- Vídeo: Create an R Markdown Template and Share It
- Vídeo: Create an R Package with an R Markdown Template
- Quiz pour s'exercer: Practice
- Vídeo: Wrap-Up
Calificado: Week 4
SEMANA 5
Working in Teams and Disseminating Templates and Reports
This module focuses on helpful tips for sharing and using the templates you create, as well as methods for organizing content. We'll also look at a few web-publishing services.
6 videos, 2 lecturas, 1 cuestionario de práctica
- Lecture: [Lecture Prep] - Code File
- Vídeo: Organizing Components - Files, Documents, and Codes
- Vídeo: Disseminate Your Files via RPubs and GitHub
- Lecture: Resources on Dissemination
- Vídeo: Communicating to Your Team on How to Use Your Templates and Projects
- Vídeo: More Ways to Disseminate Your Files
- Quiz pour s'exercer: Practice
- Vídeo: Wrap-Up
Calificado: Week 5
Preguntas Frecuentes
Cómo funciona
Travail en cours
Chaque cours fonctionne comme un manuel interactif en proposant des vidéos préenregistrées, des quiz et des projets.
Aide de la part de vos pairs
Connectez-vous à des milliers d'autres étudiants et débattez sur des idées, discutez le contenu du cours et obtenez de l'aide pour en maîtriser les concepts.
Certificats
Obtenez une reconnaissance officielle pour votre travail et partagez votre réussite avec vos amis, vos collègues et vos employeurs.
Creadores
Emory University
Emory University, located in Atlanta, Georgia, is one of the world's leading research universities. Its mission is to create, preserve, teach and apply knowledge in the service of humanity.
Tarifa
| Comprar curso | |
|---|---|
| Accede a los materiales del curso | Disponible |
| Accede a los materiales con calificación | Disponible |
| Recibe una calificación final | Disponible |
| Obtén un Certificado de curso para compartir | Disponible |
Calificaciones y revisiones
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