Chevron Left
Volver a Whole genome sequencing of bacterial genomes - tools and applications

Opiniones y comentarios de aprendices correspondientes a Whole genome sequencing of bacterial genomes - tools and applications por parte de Universidad Técnica de Dinamarca (DTU)

4.6
estrellas
1,129 calificaciones
296 reseña

Acerca del Curso

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

Principales reseñas

AP

19 de jul. de 2020

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB

9 de jun. de 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

Filtrar por:

101 - 125 de 301 revisiones para Whole genome sequencing of bacterial genomes - tools and applications

por Sanam P

15 de abr. de 2020

Enjoyed this course. Now, I do have much idea in WGS. Thank you all the instructors for designing this course.

por Carlos H C

19 de nov. de 2017

A clear and very didactic course on the tools that DTU offers to analyze genomes. Thanks for the classes!

por ALEXANDROS D

26 de jun. de 2019

Very useful and helpful course to know how to interprete your results in different platforms and tools.

por Nguyễn H T T

3 de ago. de 2021

A very useful and practical course. Ms. Pimlapas Leekitcharoenphon's lectures are easy to understand.

por Parinda B

18 de jun. de 2020

It was a great experience. I really enjoyed doing the course and hope tit will help me in the future

por Suprim T

11 de may. de 2020

Although I have 5 starred the course, a more practical approach could be incorporated in the course.

por Md. M A

24 de may. de 2020

Really excellent course. Must suggested for those who have interest in WGS(Whole Genome Sequencing)

por Kathya A O

11 de jul. de 2020

Definitely gained a lot more than i expected! It was very helpful and I would really recommend it.

por Anushka J

16 de abr. de 2020

the experience of learning this course was amazing. the faculties explained everything very well.

por MUTSHIENE D E

29 de mar. de 2019

Great and very insightful course. It really shed light on many aspects on whole genome sequencing

por Josue D C C

3 de oct. de 2018

Excelente curso, brinda una gran cantidad de herramientas muy útiles para realizar investigación.

por Hamza A D

9 de nov. de 2018

I like this course very much! The instructors were really helpful in getting their point across.

por Kerly R

20 de ago. de 2021

Muchas gracias por su contenido valioso para realizar proyectos de investigación bioinformático

por Mohammed Y

20 de ago. de 2020

This was an awesome exposure. I would like to learn more about metagenomics in the next course.

por Carlos A M V

15 de jul. de 2021

A really great option to learn how to use web tools for genomic analysis. It is well explained

por Jaswandi

1 de jun. de 2020

Excellent course with easy to understand explanation and illustration from the instructors.

por Sonali S

2 de ago. de 2019

Coursera gave me confidence and information about latest knowledge. Many thanks to coursera

por Jana M

15 de dic. de 2018

Great course, but very challenging. You need to be advanced in biology to do this course.

por WAI K L

27 de nov. de 2018

Great course that help student to understand the application for non computing scientist.

por John A T L

4 de jun. de 2020

It is an amazing course, very educational, clear, and helps to put concepts in practice.

por Dwayne P

3 de sep. de 2017

Excellent, had so much fun doing the course. Thank you DTU team, you guys are amazing.

por Josep R C

8 de oct. de 2020

A very complete course about how to use the genomic tools freely available at the CGE

por Gajanan T

25 de sep. de 2020

Thank you so much, this course is very informative and helpful in my academic carrier

por J K . S

11 de feb. de 2018

FANTASTIC COURSE...!!!! HELPED ME TO DEVELOP INTEREST IN MOLECULAR BIOLOGY .