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Opiniones y comentarios de aprendices correspondientes a Whole genome sequencing of bacterial genomes - tools and applications por parte de Universidad Técnica de Dinamarca (DTU)

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1,056 calificaciones
280 reseña

Acerca del Curso

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

Principales reseñas

AP
19 de jul. de 2020

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB
9 de jun. de 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

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151 - 175 de 283 revisiones para Whole genome sequencing of bacterial genomes - tools and applications

por Zuzana K

25 de feb. de 2020

Great course, I found it extremely helpful.

por Shimul D

30 de may. de 2020

That was really awesome.Thanks to everyone

por Ahmed E A e

31 de oct. de 2018

It isa fantastic course to spend your time

por Kris s

8 de dic. de 2017

Genuinly seems fun.

Keep it up Team at TUD

por Valourstar M

15 de nov. de 2017

developing skills in sequencing techniques

por Sonia R Q Q

16 de sep. de 2019

a complete an interesting course, thanks!

por Md. A A

26 de jul. de 2020

Its an awesome and very helpful course

por Shakil A S

31 de ago. de 2020

Too much tough but still too amazing!

por Sharma

25 de nov. de 2019

Great course. Excellent for research.

por Dordia R

26 de jun. de 2020

practical and clear. Really helpful!

por Deepak S

2 de abr. de 2020

Excellent course, great instructors.

por Eunice O

26 de sep. de 2020

such an excellent practical course.

por Prince M

29 de oct. de 2021

AMAZING COURSE THANK YOU VERY MUCH

por Tahir H

23 de dic. de 2019

a good experience to get knowledge

por Jenny S

11 de jun. de 2020

really helpful and awesome course

por Manaswini K

9 de jun. de 2020

very useful ,thank you so much !!

por Rafael P

3 de jun. de 2018

Great Course!, congratulations!

por Ibrahim H

9 de nov. de 2019

This lecuers exterimly useful.

por 1806071

8 de sep. de 2019

Very very informative course

por Pamela M

21 de abr. de 2021

The best course about WGS!

por Mayur M

25 de jun. de 2020

Very Clear and informative

por Alexandru B

25 de mar. de 2018

very useful. thanks a lot.

por Moayad M A

21 de ago. de 2017

very easy and interactive

por HARISH A 1

18 de jun. de 2020

i had finally learned

it

por Mark R

5 de jul. de 2018

简单明了,适合初学者和做细菌分型溯源的生物学家