3D SARS-CoV-19 Protein Visualization With Biopython

4.5
estrellas
41 calificaciones
ofrecido por
Coursera Project Network
En este Proyecto guiado, tú:

Biological sequence/ Data manipulation with Biopython

Query Biological Databases using Biopython & web-scraping

Create an interactive 3D model of SARS-CoV-19 Protein

Clock2 hours
IntermediateIntermedio
CloudNo se necesita descarga
VideoVideo de pantalla dividida
Comment DotsInglés (English)
LaptopSolo escritorio

In this project you will create an interactive three-dimensional (3D) representation of SARS-CoV-19 (Coronavirus) protein structures & publication-quality pictures of the same, understand properties of SARS-CoV-19 genome, handle biological sequence data stored in FASTA & PDB (Protein Data Bank) and XML format, and get insights from this data using Biopython. This hands-on project will also give you a glimpse of tasks a Bioinformatician performs on a daily basis, along with the up-to-date concepts and database use cases in the field of Medical Research and Human genetics. In this project, we will also cover basics about important databases used by biologists and biotechnologists, along with the type of sequence data we can access and visualize from these databases using Biopython & Jupyter notebook.

Habilidades que desarrollarás

SARS-CoV-19BiopythonPython ProgrammingBioinformaticsBiotechnology

Aprende paso a paso

En un video que se reproduce en una pantalla dividida con tu área de trabajo, tu instructor te guiará en cada paso:

  1. Introduction to Biopython

  2. Understand FASTA file format

  3. Sequence manipulation using Biopython

  4. Transcription & Translation studies

  5. Perform Basic Local Alignment using NCBI-BLAST

  6. Reading PDB file

  7. Visualizing SARS-CoV-19 Protein structures

Cómo funcionan los proyectos guiados

Tu espacio de trabajo es un escritorio virtual directamente en tu navegador, no requiere descarga.

En un video de pantalla dividida, tu instructor te guía paso a paso

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