This course focuses on the concepts and tools behind reporting modern data analyses in a reproducible manner. Reproducible research is the idea that data analyses, and more generally, scientific claims, are published with their data and software code so that others may verify the findings and build upon them. The need for reproducibility is increasing dramatically as data analyses become more complex, involving larger datasets and more sophisticated computations. Reproducibility allows for people to focus on the actual content of a data analysis, rather than on superficial details reported in a written summary. In addition, reproducibility makes an analysis more useful to others because the data and code that actually conducted the analysis are available. This course will focus on literate statistical analysis tools which allow one to publish data analyses in a single document that allows others to easily execute the same analysis to obtain the same results.
Este curso forma parte de Programa Especializado - Ciencia de Datos
Reproducible Research
ofrecido por
Qué aprenderás
Determine the reproducibility of analysis project
Organize data analysis to help make it more reproducible
Publish reproducible web documents using Markdown
Write up a reproducible data analysis using knitr
Habilidades que obtendrás
Programa - Qué aprenderás en este curso
Week 1: Concepts, Ideas, & Structure
This week will cover the basic ideas of reproducible research since they may be unfamiliar to some of you. We also cover structuring and organizing a data analysis to help make it more reproducible. I recommend that you watch the videos in the order that they are listed on the web page, but watching the videos out of order isn't going to ruin the story.
Week 2: Markdown & knitr
This week we cover some of the core tools for developing reproducible documents. We cover the literate programming tool knitr and show how to integrate it with Markdown to publish reproducible web documents. We also introduce the first peer assessment which will require you to write up a reproducible data analysis using knitr.
Week 3: Reproducible Research Checklist & Evidence-based Data Analysis
This week covers what one could call a basic check list for ensuring that a data analysis is reproducible. While it's not absolutely sufficient to follow the check list, it provides a necessary minimum standard that would be applicable to almost any area of analysis.
Week 4: Case Studies & Commentaries
This week there are two case studies involving the importance of reproducibility in science for you to watch.
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Principales revisiones
My favorite course, at least it gives me an argument why scripted statistics is awesome and can be applied to a number of data related activities. Recycling chunks of code has proven useful to me.
Of course, I liked this course. There was even an extra non-graded assignment. Plus two graded assignments. Quality instruction videos and lots of practice. Everything a learner needs.
Instructores
Roger D. Peng, PhD
Associate Professor, Biostatistics
Jeff Leek, PhD
Associate Professor, Biostatistics
Brian Caffo, PhD
Professor, BiostatisticsAcerca de Universidad Johns Hopkins
Acerca del programa especializado Ciencia de Datos
Preguntas Frecuentes
¿Cuándo podré acceder a las lecciones y tareas?
Una vez que te inscribes para obtener un Certificado, tendrás acceso a todos los videos, cuestionarios y tareas de programación (si corresponde). Las tareas calificadas por compañeros solo pueden enviarse y revisarse una vez que haya comenzado tu sesión. Si eliges explorar el curso sin comprarlo, es posible que no puedas acceder a determinadas tareas.
¿Qué recibiré si me suscribo a este Programa especializado?
Cuando te inscribes en un curso, obtienes acceso a todos los cursos que forman parte del Programa especializado y te darán un Certificado cuando completes el trabajo. Se añadirá tu Certificado electrónico a la página Logros. Desde allí, puedes imprimir tu Certificado o añadirlo a tu perfil de LinkedIn. Si solo quieres leer y visualizar el contenido del curso, puedes auditar el curso sin costo.
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¿Hay ayuda económica disponible?
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